Suggestive GxE (P < 5e-6)

chr4_11944206_A_G

Allele freq

Stratified OR

G param by E
AA AG GG AG GG
procmeatqcm_v2=0 1 1.08 (1.03-1.14) 1.16 (1.07-1.25) 1.08 (1.03-1.14) 1.16 (1.07-1.25)
p0 P= 1 P= 0.0028 P= 0.00014 P= 0.0028 P= 0.00014
procmeatqcm_v2=1 1.57 (1.42-1.73) 1.42 (1.3-1.54) 1.22 (1.08-1.38) 0.9 (0.83-0.98) 0.78 (0.69-0.88)
p1 P= 1.2e-19 P= 6.5e-16 P= 0.0012 P= 0.019 P= 6.4e-05
E param by G
procmeatqcm_v2 1.57 (1.42-1.73) 1.31 (1.2-1.43) 1.06 (0.91-1.23)
p P= 1.2e-19 P= 6.1e-09 P= 0.46

Interaction Plot

Locuszoom

Func Annot

chr15_92814380_C_T

Allele freq

Stratified OR

G param by E
CC CT TT CT TT
procmeatqcm_v2=0 1 0.89 (0.77-1.02) 0.55 (0.2-1.47) 0.89 (0.77-1.02) 0.55 (0.2-1.47)
p0 P= 1 P= 0.083 P= 0.23 P= 0.083 P= 0.23
procmeatqcm_v2=1 1.33 (1.24-1.43) 2.86 (2.12-3.85) 4.3 (0.17-106.6) 2.14 (1.59-2.88) 3.22 (0.13-79.92)
p1 P= 4.8e-15 P= 4.8e-12 P= 0.37 P= 5e-07 P= 0.48
E param by G
procmeatqcm_v2 1.33 (1.24-1.43) 3.22 (2.22-4.66) 7.85 (0.17-358.94)
p P= 4.8e-15 P= 5.9e-10 P= 0.29

Interaction Plot

Locuszoom

Func Annot

chr8_59807881_A_C

Allele freq

Stratified OR

G param by E
AA AC CC AC CC
procmeatqcm_v2=0 1 1.11 (0.98-1.25) 0.8 (0.28-2.27) 1.11 (0.98-1.25) 0.8 (0.28-2.27)
p0 P= 1 P= 0.094 P= 0.68 P= 0.094 P= 0.68
procmeatqcm_v2=1 1.4 (1.3-1.51) 0.82 (0.67-1.01) 0.21 (0.02-2.05) 0.59 (0.48-0.72) 0.15 (0.02-1.46)
p1 P= 9.2e-20 P= 0.058 P= 0.18 P= 1.5e-07 P= 0.1
E param by G
procmeatqcm_v2 1.4 (1.3-1.51) 0.74 (0.57-0.97) 0.27 (0.01-4.88)
p P= 9.2e-20 P= 0.026 P= 0.37

Interaction Plot

Locuszoom

Func Annot

chr1_21015685_G_A

Allele freq

Stratified OR

G param by E
GG GA AA GA AA
procmeatqcm_v2=0 1 1.06 (1-1.12) 1.23 (1.06-1.43) 1.06 (1-1.12) 1.23 (1.06-1.43)
p0 P= 1 P= 0.04 P= 0.0067 P= 0.04 P= 0.0067
procmeatqcm_v2=1 1.48 (1.36-1.6) 1.27 (1.16-1.4) 0.98 (0.76-1.25) 0.86 (0.79-0.94) 0.66 (0.52-0.84)
p1 P= 4.1e-21 P= 5.1e-07 P= 0.84 P= 0.0014 P= 0.00081
E param by G
procmeatqcm_v2 1.48 (1.36-1.6) 1.2 (1.07-1.34) 0.79 (0.57-1.1)
p P= 4.1e-21 P= 0.0016 P= 0.16

Interaction Plot

Locuszoom

Func Annot

chr14_24188606_C_T

Allele freq

Stratified OR

G param by E
CC CT TT CT TT
procmeatqcm_v2=0 1 1.15 (1.08-1.23) 1.07 (0.83-1.37) 1.15 (1.08-1.23) 1.07 (0.83-1.37)
p0 P= 1 P= 1.5e-05 P= 0.61 P= 1.5e-05 P= 0.61
procmeatqcm_v2=1 1.46 (1.35-1.57) 1.19 (1.07-1.32) 1.27 (0.87-1.87) 0.81 (0.74-0.9) 0.87 (0.6-1.28)
p1 P= 4.1e-22 P= 0.0017 P= 0.22 P= 6.9e-05 P= 0.49
E param by G
procmeatqcm_v2 1.46 (1.35-1.57) 1.03 (0.9-1.18) 1.19 (0.71-2)
p P= 4.1e-22 P= 0.66 P= 0.51

Interaction Plot

Locuszoom

Func Annot

chr7_100511033_A_G

Allele freq

Stratified OR

G param by E
AA AG GG AG GG
procmeatqcm_v2=0 1 1.22 (1.07-1.39) 5.98 (1.24-28.92) 1.22 (1.07-1.39) 5.98 (1.24-28.92)
p0 P= 1 P= 0.0037 P= 0.026 P= 0.0037 P= 0.026
procmeatqcm_v2=1 1.4 (1.3-1.51) 0.91 (0.73-1.13) 0.13 (0.01-1.72) 0.65 (0.52-0.81) 0.09 (0.01-1.23)
p1 P= 1e-19 P= 0.39 P= 0.12 P= 9.8e-05 P= 0.071
E param by G
procmeatqcm_v2 1.4 (1.3-1.51) 0.75 (0.56-1) 0.02 (0-0.71)
p P= 1e-19 P= 0.047 P= 0.031

Interaction Plot

Locuszoom

Func Annot

chr16_23076410_C_T

Allele freq

Stratified OR

G param by E
CC CT TT CT TT
procmeatqcm_v2=0 1 1.12 (1.07-1.18) 1.09 (0.99-1.19) 1.12 (1.07-1.18) 1.09 (0.99-1.19)
p0 P= 1 P= 4.6e-06 P= 0.08 P= 4.6e-06 P= 0.08
procmeatqcm_v2=1 1.56 (1.43-1.7) 1.31 (1.21-1.43) 1.35 (1.16-1.56) 0.84 (0.78-0.91) 0.86 (0.75-1)
p1 P= 1.5e-23 P= 3.5e-10 P= 6.6e-05 P= 2.3e-05 P= 0.046
E param by G
procmeatqcm_v2 1.56 (1.43-1.7) 1.17 (1.06-1.28) 1.24 (1.03-1.5)
p P= 1.5e-23 P= 0.0013 P= 0.025

Interaction Plot

Locuszoom

Func Annot

chr9_114385930_A_G

Allele freq

Stratified OR

G param by E
AA AG GG AG GG
procmeatqcm_v2=0 1 0.96 (0.91-1.01) 0.95 (0.88-1.03) 0.96 (0.91-1.01) 0.95 (0.88-1.03)
p0 P= 1 P= 0.12 P= 0.19 P= 0.12 P= 0.19
procmeatqcm_v2=1 1.21 (1.11-1.32) 1.4 (1.29-1.53) 1.64 (1.44-1.87) 1.16 (1.07-1.26) 1.36 (1.19-1.55)
p1 P= 3.8e-05 P= 4.8e-15 P= 1.3e-13 P= 0.00039 P= 3.2e-06
E param by G
procmeatqcm_v2 1.21 (1.11-1.32) 1.46 (1.33-1.6) 1.73 (1.47-2.04)
p P= 3.8e-05 P= 1.3e-15 P= 3.9e-11

Interaction Plot

Locuszoom

Func Annot

chr18_21029284_C_T

Allele freq

Stratified OR

G param by E
CC CT TT CT TT
procmeatqcm_v2=0 1 0.82 (0.72-0.94) 0.63 (0.17-2.37) 0.82 (0.72-0.94) 0.63 (0.17-2.37)
p0 P= 1 P= 0.0037 P= 0.49 P= 0.0037 P= 0.49
procmeatqcm_v2=1 1.33 (1.24-1.43) 2.17 (1.72-2.76) 9.04 (0.35-230.21) 1.63 (1.29-2.07) 6.79 (0.27-172.91)
p1 P= 9.3e-15 P= 1.3e-10 P= 0.18 P= 4.2e-05 P= 0.25
E param by G
procmeatqcm_v2 1.33 (1.24-1.43) 2.65 (1.95-3.6) 14.38 (0.26-809.18)
p P= 9.3e-15 P= 4.3e-10 P= 0.19

Interaction Plot

Locuszoom

Func Annot

chr5_71909347_C_T

Allele freq

Stratified OR

G param by E
CC CT TT CT TT
procmeatqcm_v2=0 1 1.15 (1.07-1.24) 1.69 (1.21-2.38) 1.15 (1.07-1.24) 1.69 (1.21-2.38)
p0 P= 1 P= 0.00016 P= 0.0022 P= 0.00016 P= 0.0022
procmeatqcm_v2=1 1.44 (1.33-1.55) 1.24 (1.09-1.4) 0.62 (0.33-1.15) 0.86 (0.76-0.97) 0.43 (0.23-0.8)
p1 P= 7.4e-21 P= 0.00077 P= 0.13 P= 0.016 P= 0.0075
E param by G
procmeatqcm_v2 1.44 (1.33-1.55) 1.07 (0.92-1.25) 0.37 (0.16-0.83)
p P= 7.4e-21 P= 0.38 P= 0.016

Interaction Plot

Locuszoom

Func Annot

chr15_98258859_C_T

Allele freq

Stratified OR

G param by E
CC CT TT CT TT
procmeatqcm_v2=0 1 0.83 (0.75-0.92) 0.91 (0.43-1.9) 0.83 (0.75-0.92) 0.91 (0.43-1.9)
p0 P= 1 P= 0.00022 P= 0.8 P= 0.00022 P= 0.8
procmeatqcm_v2=1 1.32 (1.23-1.42) 1.87 (1.57-2.23) 1.48 (0.27-8.23) 1.41 (1.19-1.68) 1.12 (0.2-6.21)
p1 P= 4.2e-14 P= 4.8e-12 P= 0.65 P= 9.6e-05 P= 0.9
E param by G
procmeatqcm_v2 1.32 (1.23-1.42) 2.25 (1.8-2.83) 1.63 (0.18-14.73)
p P= 4.2e-14 P= 1.9e-12 P= 0.66

Interaction Plot

Locuszoom

Func Annot

chr2_43003484_A_C

Allele freq

Stratified OR

G param by E
AA AC CC AC CC
procmeatqcm_v2=0 1 1.11 (1.02-1.2) 1.17 (0.74-1.84) 1.11 (1.02-1.2) 1.17 (0.74-1.84)
p0 P= 1 P= 0.012 P= 0.51 P= 0.012 P= 0.51
procmeatqcm_v2=1 1.42 (1.32-1.53) 1.07 (0.94-1.22) 0.93 (0.5-1.7) 0.76 (0.67-0.86) 0.65 (0.36-1.2)
p1 P= 1.4e-20 P= 0.31 P= 0.8 P= 1.4e-05 P= 0.17
E param by G
procmeatqcm_v2 1.42 (1.32-1.53) 0.97 (0.82-1.15) 0.79 (0.34-1.87)
p P= 1.4e-20 P= 0.71 P= 0.59

Interaction Plot

Locuszoom

Func Annot

chr13_21949790_T_A

Allele freq

Stratified OR

G param by E
TT TA AA TA AA
procmeatqcm_v2=0 1 0.86 (0.76-0.96) 0.64 (0.3-1.4) 0.86 (0.76-0.96) 0.64 (0.3-1.4)
p0 P= 1 P= 0.01 P= 0.27 P= 0.01 P= 0.27
procmeatqcm_v2=1 1.33 (1.23-1.43) 2.15 (1.73-2.69) 0.3 (0.01-8.35) 1.63 (1.3-2.03) 0.23 (0.01-6.3)
p1 P= 2.9e-14 P= 1.2e-11 P= 0.48 P= 1.7e-05 P= 0.38
E param by G
procmeatqcm_v2 1.33 (1.23-1.43) 2.52 (1.9-3.34) 0.47 (0.01-20.18)
p P= 2.9e-14 P= 1.4e-10 P= 0.69

Interaction Plot

Locuszoom

Func Annot